HDOCK SERVER
Protein-protein and protein-DNA/RNA docking based on a hybrid algorithm of template-based modeling and ab initio free docking. |
[Huang Lab] [HDOCK] [Help] [Output example] |
Receptor style
Receptor color
Pure
Rainbow MODEL No.
Ligand style
Action
|
Molecule | PDB ID | Chain ID | Align_length | Coverage | Seq_ID (%) |
---|---|---|---|---|---|
Receptor | 1CGI | E | 245 | 1.000 | 100.0 |
Ligand | 1CGI | I | 56 | 1.000 | 100.0 |
Rank | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 |
---|---|---|---|---|---|---|---|---|---|---|
Docking Score | -444.95 | -244.21 | -229.46 | -210.01 | -206.24 | -199.44 | -197.73 | -196.32 | -196.07 | -194.67 |
Ligand rmsd (Å) | 0.42 | 18.23 | 7.39 | 11.07 | 15.61 | 13.76 | 19.29 | 18.82 | 13.83 | 15.74 |
(a) | Row 1: The ranks of the models. |
(b) | Row 2: The docking energy scores. |
(c) | Row 3: The ligand RMSDs from the input structures or modeled structures by homology modeling. |