HDOCK SERVER

Protein-protein and protein-DNA/RNA docking based on a hybrid algorithm of template-based modeling and ab initio free docking.

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Your HDOCK results for job example

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Template Information
MoleculePDB IDChain IDAlign_lengthCoverageSeq_ID (%)
Receptor1CGIE2451.000100.0
Ligand1CGII561.000100.0

Download Files
Receptor PDB file  Ligand PDB file   HDOCK Output  
 [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20]  
Top 10 Predictions  Top 100 Predictions  All the results in a package  

Summary of the top 10 models
Rank12345678910
Docking Score-444.95 -244.21 -229.46 -210.01 -206.24 -199.44 -197.73 -196.32 -196.07 -194.67
Ligand rmsd (Å)0.42 18.23 7.39 11.07 15.61 13.76 19.29 18.82 13.83 15.74

(a)Row 1: The ranks of the models.
(b)Row 2: The docking energy scores.
(c)Row 3: The ligand RMSD from the initially modeled structures using homologous templates.


huanglab@hust.edu.cn, Lab of Biophysics and Molecular Modeling